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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2755CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. (239 aa)    
Predicted Functional Partners:
MXAN_2756
Hypothetical protein; Identified by Glimmer2; putative.
       0.774
MXAN_2757
DNA polymerase IV, X family/PHP domain protein; Identified by match to protein family HMM PF02811.
       0.732
MXAN_2397
YcaO-like fatty acid binding domain protein; Identified by match to protein family HMM PF02624; match to protein family HMM TIGR00702.
  
  
 0.616
MXAN_4931
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.616
MXAN_7067
Identified by match to protein family HMM PF00881.
  
  
 0.591
MXAN_3576
Putative membrane protein; Identified by match to protein family HMM PF07786.
  
    0.587
MXAN_1598
ABC transporter, permease protein, ABC-2 family; Identified by match to protein family HMM PF01061.
  
  
 0.508
MXAN_0553
ABC transporter, permease protein, ABC-2 family; Identified by match to protein family HMM PF01061.
  
  
 0.507
MXAN_0722
Putative membrane protein; Identified by match to protein family HMM PF01061.
  
  
 0.507
MXAN_5316
Putative daunorubicin resistance ABC transporter, permease protein; Identified by match to protein family HMM PF01061.
  
  
 0.507
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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