MXAN_2756 protein (Myxococcus xanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MXAN_2756

Hypothetical protein; Identified by Glimmer2; putative. (206 aa)

Predicted Functional Partners:

MXAN_2755

0.774

MXAN_2757

0.728

MXAN_6735

0.498

MXAN_2754

0.464

MXAN_3935

0.446

MXAN_0733

0.417

glpK

0.412

MXAN_6440

0.405

Your Current Organism:

Myxococcus xanthus

NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MXAN_0733	MXAN_2756	MXAN_0733	MXAN_2756	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Hypothetical protein; Identified by Glimmer2; putative.	0.417
MXAN_0733	MXAN_3935	MXAN_0733	MXAN_3935	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Non-ribosomal peptide synthase/polyketide synthase Ta1; Identified by similarity to GB:CAB38084.1; match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF02801; match to protein family HMM TIGR01733.	0.638
MXAN_0733	MXAN_6440	MXAN_0733	MXAN_6440	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	PspC domain protein; Identified by match to protein family HMM PF04024.	0.567
MXAN_0733	MXAN_6735	MXAN_0733	MXAN_6735	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518.	0.988
MXAN_2754	MXAN_2755	MXAN_2754	MXAN_2755	Peptidase, M4 (thermolysin) family; Identified by similarity to SP:P05806; similarity to GB:AAB62279.1; match to protein family HMM PF01447; match to protein family HMM PF01483; match to protein family HMM PF02868; match to protein family HMM PF03413; match to protein family HMM PF07504.	CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517.	0.437
MXAN_2754	MXAN_2756	MXAN_2754	MXAN_2756	Peptidase, M4 (thermolysin) family; Identified by similarity to SP:P05806; similarity to GB:AAB62279.1; match to protein family HMM PF01447; match to protein family HMM PF01483; match to protein family HMM PF02868; match to protein family HMM PF03413; match to protein family HMM PF07504.	Hypothetical protein; Identified by Glimmer2; putative.	0.464
MXAN_2754	MXAN_2757	MXAN_2754	MXAN_2757	Peptidase, M4 (thermolysin) family; Identified by similarity to SP:P05806; similarity to GB:AAB62279.1; match to protein family HMM PF01447; match to protein family HMM PF01483; match to protein family HMM PF02868; match to protein family HMM PF03413; match to protein family HMM PF07504.	DNA polymerase IV, X family/PHP domain protein; Identified by match to protein family HMM PF02811.	0.408
MXAN_2755	MXAN_2754	MXAN_2755	MXAN_2754	CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517.	Peptidase, M4 (thermolysin) family; Identified by similarity to SP:P05806; similarity to GB:AAB62279.1; match to protein family HMM PF01447; match to protein family HMM PF01483; match to protein family HMM PF02868; match to protein family HMM PF03413; match to protein family HMM PF07504.	0.437
MXAN_2755	MXAN_2756	MXAN_2755	MXAN_2756	CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517.	Hypothetical protein; Identified by Glimmer2; putative.	0.774
MXAN_2755	MXAN_2757	MXAN_2755	MXAN_2757	CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517.	DNA polymerase IV, X family/PHP domain protein; Identified by match to protein family HMM PF02811.	0.732
MXAN_2756	MXAN_0733	MXAN_2756	MXAN_0733	Hypothetical protein; Identified by Glimmer2; putative.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.417
MXAN_2756	MXAN_2754	MXAN_2756	MXAN_2754	Hypothetical protein; Identified by Glimmer2; putative.	Peptidase, M4 (thermolysin) family; Identified by similarity to SP:P05806; similarity to GB:AAB62279.1; match to protein family HMM PF01447; match to protein family HMM PF01483; match to protein family HMM PF02868; match to protein family HMM PF03413; match to protein family HMM PF07504.	0.464
MXAN_2756	MXAN_2755	MXAN_2756	MXAN_2755	Hypothetical protein; Identified by Glimmer2; putative.	CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517.	0.774
MXAN_2756	MXAN_2757	MXAN_2756	MXAN_2757	Hypothetical protein; Identified by Glimmer2; putative.	DNA polymerase IV, X family/PHP domain protein; Identified by match to protein family HMM PF02811.	0.728
MXAN_2756	MXAN_3935	MXAN_2756	MXAN_3935	Hypothetical protein; Identified by Glimmer2; putative.	Non-ribosomal peptide synthase/polyketide synthase Ta1; Identified by similarity to GB:CAB38084.1; match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF02801; match to protein family HMM TIGR01733.	0.446
MXAN_2756	MXAN_6440	MXAN_2756	MXAN_6440	Hypothetical protein; Identified by Glimmer2; putative.	PspC domain protein; Identified by match to protein family HMM PF04024.	0.405
MXAN_2756	MXAN_6735	MXAN_2756	MXAN_6735	Hypothetical protein; Identified by Glimmer2; putative.	Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518.	0.498
MXAN_2756	glpK	MXAN_2756	MXAN_6771	Hypothetical protein; Identified by Glimmer2; putative.	Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.	0.412
MXAN_2757	MXAN_2754	MXAN_2757	MXAN_2754	DNA polymerase IV, X family/PHP domain protein; Identified by match to protein family HMM PF02811.	Peptidase, M4 (thermolysin) family; Identified by similarity to SP:P05806; similarity to GB:AAB62279.1; match to protein family HMM PF01447; match to protein family HMM PF01483; match to protein family HMM PF02868; match to protein family HMM PF03413; match to protein family HMM PF07504.	0.408
MXAN_2757	MXAN_2755	MXAN_2757	MXAN_2755	DNA polymerase IV, X family/PHP domain protein; Identified by match to protein family HMM PF02811.	CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517.	0.732