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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2777tonB domain protein; Identified by match to protein family HMM TIGR01352. (253 aa)    
Predicted Functional Partners:
phoP2
DNA-binding response regulator PhoP2; Identified by similarity to GB:AAF82621.1; match to protein family HMM PF00072; match to protein family HMM PF00486.
       0.464
phoR2
Sensor histidine kinase PhoR2; Identified by similarity to GB:AAF82620.1; match to protein family HMM PF00512; match to protein family HMM PF02518.
       0.464
MXAN_0272
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
  
 
 0.463
MXAN_1450
TonB-dependent receptor; Identified by match to protein family HMM PF00593.
  
 
 0.447
MXAN_6737
TonB-dependent receptor; Identified by match to protein family HMM PF00593.
  
 
 0.447
MXAN_6845
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01352.
  
 
 0.447
MXAN_0273
tonB system transport protein, ExbD/TolR family; Identified by similarity to SP:P05829; match to protein family HMM PF02472.
  
   0.431
MXAN_0274
Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.
  
   0.431
MXAN_0819
Transport energizing protein, ExbD/TolR family; Identified by similarity to SP:Q9ZHV9; match to protein family HMM PF02472.
  
   0.431
MXAN_1446
Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.
  
   0.431
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.