holB protein (Myxococcus xanthus) - STRING interaction network

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[Homology]

Score

holB

DNA polymerase III, delta' subunit; Identified by match to protein family HMM TIGR00678. (344 aa)

Predicted Functional Partners:

holA

0.995

dnaN

0.978

dnaE-2

0.974

MXAN_1876

0.971

dnaX

0.926

recR

0.831

MXAN_2802

0.773

ssb

0.737

dnaE

0.714

recO

0.679

Your Current Organism:

Myxococcus xanthus

NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MXAN_1876	dnaE	MXAN_1876	MXAN_3982	Exonuclease; Identified by match to protein family HMM PF00929.	DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.	0.733
MXAN_1876	dnaE-2	MXAN_1876	MXAN_5844	Exonuclease; Identified by match to protein family HMM PF00929.	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	0.972
MXAN_1876	dnaN	MXAN_1876	MXAN_0236	Exonuclease; Identified by match to protein family HMM PF00929.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.991
MXAN_1876	dnaX	MXAN_1876	MXAN_1933	Exonuclease; Identified by match to protein family HMM PF00929.	DNA polymerase III, gamma and tau subunits, truncated; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.971
MXAN_1876	holA	MXAN_1876	MXAN_2801	Exonuclease; Identified by match to protein family HMM PF00929.	DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144.	0.967
MXAN_1876	holB	MXAN_1876	MXAN_2800	Exonuclease; Identified by match to protein family HMM PF00929.	DNA polymerase III, delta' subunit; Identified by match to protein family HMM TIGR00678.	0.971
MXAN_1876	ssb	MXAN_1876	MXAN_1071	Exonuclease; Identified by match to protein family HMM PF00929.	Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	0.456
MXAN_2802	holA	MXAN_2802	MXAN_2801	Hypothetical protein; Identified by Glimmer2; putative.	DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144.	0.773
MXAN_2802	holB	MXAN_2802	MXAN_2800	Hypothetical protein; Identified by Glimmer2; putative.	DNA polymerase III, delta' subunit; Identified by match to protein family HMM TIGR00678.	0.773
dnaE	MXAN_1876	MXAN_3982	MXAN_1876	DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.	Exonuclease; Identified by match to protein family HMM PF00929.	0.733
dnaE	dnaN	MXAN_3982	MXAN_0236	DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.732
dnaE	dnaX	MXAN_3982	MXAN_1933	DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.	DNA polymerase III, gamma and tau subunits, truncated; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.678
dnaE	holA	MXAN_3982	MXAN_2801	DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.	DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144.	0.764
dnaE	holB	MXAN_3982	MXAN_2800	DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.	DNA polymerase III, delta' subunit; Identified by match to protein family HMM TIGR00678.	0.714
dnaE	ssb	MXAN_3982	MXAN_1071	DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.	Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	0.726
dnaE-2	MXAN_1876	MXAN_5844	MXAN_1876	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	Exonuclease; Identified by match to protein family HMM PF00929.	0.972
dnaE-2	dnaN	MXAN_5844	MXAN_0236	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.977
dnaE-2	dnaX	MXAN_5844	MXAN_1933	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase III, gamma and tau subunits, truncated; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.970
dnaE-2	holA	MXAN_5844	MXAN_2801	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144.	0.975
dnaE-2	holB	MXAN_5844	MXAN_2800	DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	DNA polymerase III, delta' subunit; Identified by match to protein family HMM TIGR00678.	0.974