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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2847Hypothetical protein; Identified by Glimmer2; putative. (417 aa)    
Predicted Functional Partners:
MXAN_2846
ATPase, AAA family; Identified by match to protein family HMM PF00004.
       0.580
MXAN_5975
Putative lipoprotein.
  
    0.530
MXAN_6735
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518.
 
  
 0.530
MXAN_2626
DNA internalization-related competence protein ComEC/Rec2; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361.
  
  
 0.522
MXAN_4575
Conserved hypothetical protein.
  
     0.518
MXAN_0071
Conserved hypothetical protein.
  
     0.517
MXAN_1789
ABC transporter, ATP-binding protein/peptidase, C39 family; Identified by match to protein family HMM PF00005; match to protein family HMM PF03412.
  
  
 0.517
MXAN_2853
Putative lantibiotic ABC transporter, permease/ATP-binding protein; Identified by similarity to SP:P22520; match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412.
  
  
 0.517
MXAN_3883
Protein transporter, outer membrane fimbrial usher porin (FUP) family; Identified by match to protein family HMM PF00577.
   
  
 0.505
MXAN_7147
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.
 
  
 0.504
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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