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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2857Putative lantibiotic modification protein; Identified by match to protein family HMM PF05147. (1107 aa)    
Predicted Functional Partners:
MXAN_2853
Putative lantibiotic ABC transporter, permease/ATP-binding protein; Identified by similarity to SP:P22520; match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412.
 
   
 0.954
MXAN_2855
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.937
MXAN_2856
Hypothetical protein; Identified by Glimmer2; putative.
     
 0.924
MXAN_2854
Hypothetical protein; Identified by Glimmer2; putative.
     
 0.900
MXAN_7351
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.678
MXAN_7352
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.678
MXAN_7353
Putative beta-ketoacyl-acyl carrier protein synthase; Identified by similarity to GB:AAK91994.1.
      
 0.668
MXAN_1237
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.580
MXAN_2858
Hypothetical protein; Identified by Glimmer2; putative.
       0.548
MXAN_4492
Conserved hypothetical protein; Identified by similarity to GB:AAR34300.1.
  
     0.513
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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