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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2860Conserved hypothetical protein; Identified by match to protein family HMM PF05960. (606 aa)    
Predicted Functional Partners:
MXAN_2859
SNF2/helicase domain protein; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434.
       0.773
MXAN_2631
Peptidase, M28 (aminopeptidase S) family; Identified by match to protein family HMM PF01546; match to protein family HMM PF04389.
  
     0.673
MXAN_2858
Hypothetical protein; Identified by Glimmer2; putative.
       0.658
MXAN_0075
WD40-like repeat/amidohydrolase domain protein; Identified by match to protein family HMM PF01979; match to protein family HMM PF07676; match to protein family HMM PF07969.
 
    0.545
MXAN_0100
Peptidase, M28D (aminopeptidase ES-62) subfamily; Identified by similarity to GB:AAC28365.1; similarity to GB:AAD31418.1; match to protein family HMM PF01546; match to protein family HMM PF04389.
  
     0.521
MXAN_3581
Identified by match to protein family HMM PF01401.
  
    0.513
MXAN_2373
M38 (beta-aspartyl dipeptidase) family protein; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969.
 
    0.474
MXAN_2856
Hypothetical protein; Identified by Glimmer2; putative.
       0.473
MXAN_2857
Putative lantibiotic modification protein; Identified by match to protein family HMM PF05147.
       0.473
pep
Prolyl endopeptidase precursor Pep; Identified by similarity to SP:Q06903.
 
    0.455
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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