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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2879Putative xylulokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. (535 aa)    
Predicted Functional Partners:
rpe
Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.973
MXAN_2880
Putative sphingosine-1-phosphate lyase; Identified by similarity to SP:Q8R0X7; match to protein family HMM PF00282.
 
 
 0.860
fucA
L-fuculose phosphate aldolase; Identified by similarity to SP:P11550; match to protein family HMM PF00596.
 
  
 0.687
glpD
Glycerol-3-phosphate dehydrogenase; Identified by similarity to SP:P18158; match to protein family HMM PF01266; match to protein family HMM PF01494; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.641
MXAN_6732
Class II aldolase/adducin domain protein; Identified by match to protein family HMM PF00596.
  
  
 0.607
tal
Putative transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.564
cscK
Fructokinase; Identified by similarity to SP:P40713; match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.562
MXAN_1098
Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248.
 
  
 0.532
MXAN_5998
Putative lipase; Identified by similarity to GB:BAA09135.1.
  
    0.502
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
0.496
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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