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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2889Radical SAM domain protein; Identified by match to protein family HMM PF04055. (294 aa)    
Predicted Functional Partners:
MXAN_2888
Coproporphyrinogen III oxidase family protein; Identified by match to protein family HMM PF04055; match to protein family HMM PF06969.
 
  
 0.958
MXAN_2887
Conserved hypothetical protein.
 
    0.952
MXAN_2891
WGR domain protein; Identified by match to protein family HMM PF05406.
 
    0.834
MXAN_2892
WGR domain protein; Identified by match to protein family HMM PF05406.
 
    0.834
MXAN_2890
Conserved hypothetical protein; Identified by similarity to GB:AAO37000.1.
 
    0.809
MXAN_2886
HAD-superfamily hydrolase, subfamily IA, variant 1; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549.
  
    0.780
MXAN_0803
Conserved hypothetical protein; Identified by similarity to GB:BAC71213.1.
  
     0.715
MXAN_6120
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02452.
  
     0.553
MXAN_5284
Conserved hypothetical protein; Identified by similarity to GB:CAC22731.1.
  
    0.513
MXAN_6680
Conserved hypothetical protein.
 
     0.468
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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