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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2918Putative membrane protein; Identified by match to protein family HMM PF03739. (371 aa)    
Predicted Functional Partners:
MXAN_2917
Putative membrane protein; Identified by match to protein family HMM PF03739.
 
 0.999
MXAN_1060
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.989
MXAN_2915
Putative adventurous gliding motility protein; Identified by similarity to GB:AAO66317.1; match to protein family HMM PF00515; match to protein family HMM TIGR02098.
 
     0.861
purD
Phosphoribosylamine--glycine ligase; Identified by match to protein family HMM PF01071; match to protein family HMM PF02842; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; Belongs to the GARS family.
  
    0.789
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Identified by similarity to SP:P12048; match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM TIGR00355.
       0.786
MXAN_2919
Identified by match to protein family HMM PF04932.
       0.778
MXAN_5764
Conserved hypothetical protein; Identified by similarity to GB:CAE80296.1; match to protein family HMM PF04357.
 
   
 0.623
MXAN_3025
Conserved hypothetical protein.
  
     0.606
lptD
Putative organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
  
 0.594
MXAN_5319
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
 
    0.579
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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