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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2938Identified by match to protein family HMM PF03067. (367 aa)    
Predicted Functional Partners:
MXAN_6008
Chitinase, class II; Identified by similarity to GB:AAK69033.1; match to protein family HMM PF00041; match to protein family HMM PF00704; match to protein family HMM PF02839.
  
 0.977
MXAN_2927
Glycosyl hydrolase, family 18; Identified by match to protein family HMM PF00704; match to protein family HMM PF02839; Belongs to the glycosyl hydrolase 18 family.
 
   
 0.788
MXAN_2937
Hypothetical protein; Identified by Glimmer2; putative.
       0.768
MXAN_4534
Chitinase, class I; Identified by match to protein family HMM PF00182; match to protein family HMM PF00652.
  
   
 0.730
MXAN_5466
Peptidase, S1E (streptogrisin A) subfamily; Identified by similarity to SP:Q05308; match to protein family HMM PF00089; match to protein family HMM PF00652.
  
    0.663
MXAN_6205
Microbial collagenase; Identified by similarity to SP:P43154; match to protein family HMM PF01752; match to protein family HMM PF04151.
  
   
 0.638
MXAN_5269
S1D (lysyl endopeptidase) subfamily C-terminal domain protein; Identified by similarity to SP:P15636; match to protein family HMM PF00754; match to protein family HMM PF00801; match to protein family HMM TIGR01409.
  
   
 0.559
MXAN_1630
Putative chitinase; Identified by similarity to GB:AAP04616.1; match to protein family HMM PF00704; Belongs to the glycosyl hydrolase 18 family.
 
   
 0.551
celA
Endoglucanase; Identified by similarity to SP:P33682; Belongs to the glycosyl hydrolase family 6.
  
  
 0.543
fibA
Matrix-associated zinc metalloprotease FibA; Identified by similarity to GB:AAL60237.1; match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF04151; match to protein family HMM PF07504.
   
  
 0.536
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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