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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2970Identified by match to protein family HMM PF00375; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (431 aa)    
Predicted Functional Partners:
MXAN_2971
Conserved hypothetical protein; Identified by similarity to GB:CAE79771.1.
       0.531
MXAN_5503
Polar amino acid transport system substrate-binding protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
  
  
 0.459
MXAN_1568
LamB/YcsF family/allophanate hydrolase family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
  
 0.451
MXAN_2972
Hypothetical protein; Identified by Glimmer2; putative.
       0.420
MXAN_2326
Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
 
 
  
 0.412
MXAN_5040
Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
 
 
  
 0.412
MXAN_6841
Major facilitator family transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
  
  
 0.405
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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