STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvEBranched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (315 aa)    
Predicted Functional Partners:
MXAN_1284
2-isopropylmalate synthase/homocitrate synthase family protein; Identified by match to protein family HMM PF00682; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
 0.943
MXAN_0971
Aspartate kinase/homoserine dehydrogenase; Identified by similarity to SP:P00561; match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF03447; match to protein family HMM TIGR00657.
  
 
 0.941
MXAN_2278
Aspartate kinase/homoserine dehydrogenase; Identified by similarity to SP:P00561; match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447; match to protein family HMM TIGR00657.
  
 
 0.941
MXAN_1074
Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.931
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
    
 0.927
MXAN_4565
2-oxoisovalerate dehydrogenase complex, E1 component, beta subunit; Identified by similarity to SP:P37941; match to protein family HMM PF02779; match to protein family HMM PF02780.
  
 0.925
MXAN_4564
2-oxoisovalerate dehydrogenase complex, E1 component, alpha subunit; Identified by similarity to SP:P37940; match to protein family HMM PF00676.
  
 
 0.919
MXAN_0970
Cys/Met metabolism PLP-dependent enzyme; Identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM PF03841.
   
 0.915
MXAN_1955
Cys/Met metabolism PLP-dependent enzyme; Identified by match to protein family HMM PF01053.
   
 0.915
MXAN_2035
Cys/Met metabolism PLP-dependent enzyme; Identified by match to protein family HMM PF01053.
   
 0.915
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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