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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_2995Peptidase, S1C (protease Do) subfamily; Identified by similarity to GB:AAC43718.1; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037. (493 aa)    
Predicted Functional Partners:
MXAN_4045
Putative lipoprotein.
  
  
 
0.923
MXAN_6647
Peptidase, S1C (protease DO) family; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037.
  
  
 
0.905
MXAN_2996
GDSL-like lipase/acylhydrolase; Identified by match to protein family HMM PF00657.
  
  
 0.714
MXAN_2994
Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family.
       0.528
MXAN_6735
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518.
  
  
 0.504
MXAN_2993
Conserved domain protein; Identified by similarity to GB:CAB95474.1.
       0.476
MXAN_3935
Non-ribosomal peptide synthase/polyketide synthase Ta1; Identified by similarity to GB:CAB38084.1; match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF02801; match to protein family HMM TIGR01733.
  
 0.449
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
 
   0.439
MXAN_0733
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
  
  
 0.427
MXAN_6440
PspC domain protein; Identified by match to protein family HMM PF04024.
  
  
 0.414
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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