Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MXAN_3003MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. (260 aa)    
Predicted Functional Partners:
MXAN_3004
Conserved hypothetical protein.
 
 
 0.970
MXAN_3005
Hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.951
aglS
Adventurous gliding motility protein AglS; Identified by similarity to GB:AAO22897.1.
 
 
 0.829
MXAN_1919
Hypothetical protein; Identified by Glimmer2; putative.
 
   0.777
MXAN_6484
Transport energizing protein, ExbD/TolR family; Identified by similarity to SP:Q9ZHV9; match to protein family HMM PF02472.
 
 
 0.759
MXAN_0819
Transport energizing protein, ExbD/TolR family; Identified by similarity to SP:Q9ZHV9; match to protein family HMM PF02472.
 
 
 0.742
MXAN_3377
FHA/TonB domain protein; Identified by match to protein family HMM PF00498; match to protein family HMM TIGR01352.
 
 
 0.731
MXAN_1922
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
 
  
 0.677
MXAN_6845
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01352.
 
 
 0.669
MXAN_4670
Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.
 
 
 0.638
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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