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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argDAcetylornithine transaminase; Identified by similarity to SP:P54752; match to protein family HMM PF00202; match to protein family HMM TIGR00707; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (414 aa)    
Predicted Functional Partners:
argF
Ornithine carbamoyltransferase; Identified by similarity to SP:P18186; match to protein family HMM PF00185; match to protein family HMM PF02729; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
 0.987
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
  
 0.972
argG
Argininosuccinate synthase; Identified by match to protein family HMM PF00764; match to protein family HMM PF06508; match to protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
 
 0.971
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
 
 0.944
MXAN_6779
Putative 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Identified by similarity to SP:P56220; Belongs to the transferase hexapeptide repeat family.
    
 0.919
argE
Acetylornithine deacetylase; Identified by similarity to GB:AAC82366.1; match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01892.
  
 
 0.915
MXAN_5106
Peptidase, M20A family; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687.
  
 
 0.915
MXAN_6777
Putative succinyl-diaminopimelate desuccinylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687.
  
 
 0.915
MXAN_3751
Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.
  
 
 0.907
MXAN_6783
Decarboxylase, group II; Identified by similarity to SP:Q9DBE0; match to protein family HMM PF00266; match to protein family HMM PF00282.
 
    
 0.901
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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