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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3025Conserved hypothetical protein. (571 aa)    
Predicted Functional Partners:
MXAN_2505
Putative general secretory pathway protein K.
  
    0.768
MXAN_6533
Putative PTS system, mannose/fructose/sorbose family, IIC component.
  
     0.759
MXAN_5053
Response regulator/GGDEF/GAF domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254.
  
     0.739
agmX
Adventurous gliding motility protein AgmX; Identified by match to protein family HMM TIGR02098.
  
     0.730
MXAN_3211
Conserved hypothetical protein.
  
     0.724
MXAN_5773
Putative lipoprotein.
  
     0.720
MXAN_3550
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.719
MXAN_5319
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
  
     0.708
MXAN_4870
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719.
  
    0.706
MXAN_2707
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.705
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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