MXAN_3030 protein (Myxococcus xanthus) - STRING interaction network

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Score

MXAN_3030

Smr domain protein; Identified by match to protein family HMM PF01713. (211 aa)

Predicted Functional Partners:

rpoZ

0.693

pyrD

0.655

MXAN_3029

0.655

rrmJ

0.595

rpsU

0.587

lolA

0.552

rpsJ

0.529

sigB

0.518

rpsL

0.511

rpsG

0.509

Your Current Organism:

Myxococcus xanthus

NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MXAN_3029	MXAN_3030	MXAN_3029	MXAN_3030	Identified by similarity to SP:P22333; match to protein family HMM PF00962.	Smr domain protein; Identified by match to protein family HMM PF01713.	0.655
MXAN_3029	pyrD	MXAN_3029	MXAN_3028	Identified by similarity to SP:P22333; match to protein family HMM PF00962.	Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.831
MXAN_3030	MXAN_3029	MXAN_3030	MXAN_3029	Smr domain protein; Identified by match to protein family HMM PF01713.	Identified by similarity to SP:P22333; match to protein family HMM PF00962.	0.655
MXAN_3030	lolA	MXAN_3030	MXAN_1473	Smr domain protein; Identified by match to protein family HMM PF01713.	Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.552
MXAN_3030	pyrD	MXAN_3030	MXAN_3028	Smr domain protein; Identified by match to protein family HMM PF01713.	Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.655
MXAN_3030	rpoZ	MXAN_3030	MXAN_4890	Smr domain protein; Identified by match to protein family HMM PF01713.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.693
MXAN_3030	rpsG	MXAN_3030	MXAN_3296	Smr domain protein; Identified by match to protein family HMM PF01713.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.509
MXAN_3030	rpsJ	MXAN_3030	MXAN_3299	Smr domain protein; Identified by match to protein family HMM PF01713.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.529
MXAN_3030	rpsL	MXAN_3030	MXAN_3295	Smr domain protein; Identified by match to protein family HMM PF01713.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.511
MXAN_3030	rpsU	MXAN_3030	MXAN_5201	Smr domain protein; Identified by match to protein family HMM PF01713.	Ribosomal protein S21; Identified by similarity to SP:P02379; match to protein family HMM PF01165; match to protein family HMM TIGR00030; Belongs to the bacterial ribosomal protein bS21 family.	0.587
MXAN_3030	rrmJ	MXAN_3030	MXAN_2973	Smr domain protein; Identified by match to protein family HMM PF01713.	Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	0.595
MXAN_3030	sigB	MXAN_3030	MXAN_3357	Smr domain protein; Identified by match to protein family HMM PF01713.	RNA polymerase sigma-B factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.518
lolA	MXAN_3030	MXAN_1473	MXAN_3030	Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Smr domain protein; Identified by match to protein family HMM PF01713.	0.552
pyrD	MXAN_3029	MXAN_3028	MXAN_3029	Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	Identified by similarity to SP:P22333; match to protein family HMM PF00962.	0.831
pyrD	MXAN_3030	MXAN_3028	MXAN_3030	Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	Smr domain protein; Identified by match to protein family HMM PF01713.	0.655
rpoZ	MXAN_3030	MXAN_4890	MXAN_3030	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Smr domain protein; Identified by match to protein family HMM PF01713.	0.693
rpoZ	rpsG	MXAN_4890	MXAN_3296	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.794
rpoZ	rpsJ	MXAN_4890	MXAN_3299	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.687
rpoZ	rpsL	MXAN_4890	MXAN_3295	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.904
rpoZ	rpsU	MXAN_4890	MXAN_5201	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Ribosomal protein S21; Identified by similarity to SP:P02379; match to protein family HMM PF01165; match to protein family HMM TIGR00030; Belongs to the bacterial ribosomal protein bS21 family.	0.754