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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3034Putative ADP-ribosylglycohydrolase; Identified by match to protein family HMM PF03747. (316 aa)    
Predicted Functional Partners:
MXAN_1646
Conserved hypothetical protein; Identified by similarity to SP:Q8KAE4; match to protein family HMM PF01661.
    
 0.896
MXAN_5330
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02464.
     0.799
MXAN_4452
Identified by match to protein family HMM PF03747.
  
     0.774
MXAN_3035
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MXAN_3033
Methyltransferase, UbiE/COQ5 family; Identified by match to protein family HMM PF01209.
 
     0.569
MXAN_6120
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02452.
 
   
 0.526
MXAN_5936
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.469
MXAN_3036
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
       0.445
MXAN_5969
Conserved hypothetical protein.
 
     0.438
MXAN_6680
Conserved hypothetical protein.
  
     0.426
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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