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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cglBAdventurous gliding motility protein CglB; Identified by similarity to GB:AAB86642.1. (416 aa)    
Predicted Functional Partners:
aglT
Adventurous gliding motility protein AglT; Identified by similarity to GB:AAO66317.1; match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
   
  
 0.812
tgl
Social gliding motility protein Tgl; Identified by similarity to GB:AAB62979.1.
     
 0.761
agmX
Adventurous gliding motility protein AgmX; Identified by match to protein family HMM TIGR02098.
      
 0.651
agmK
Adventurous gliding motility protein AgmK; Identified by similarity to GB:AAO22907.1; match to protein family HMM PF00515; match to protein family HMM PF07719.
     
 0.637
aglZ
Adventurous gliding motility protein AglZ; Required for adventurous-gliding motility (A motility), in response to environmental signals sensed by the frz chemosensory system. Forms ordered clusters that span the cell length and that remain stationary relative to the surface across which the cells move, serving as anchor points (focal, transient adhesion sites) that allow the bacterium to move forward. Clusters disassemble at the lagging cell pole.
  
  
 0.597
MXAN_3063
RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
  
    0.565
MXAN_3061
alpha-L-glutamate ligases, RimK family; Identified by similarity to SP:P17116; match to protein family HMM TIGR00768; Belongs to the RimK family.
       0.551
MXAN_3062
Hypothetical protein; Identified by Glimmer2; putative.
       0.551
tolB-2
tolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
      
 0.518
mglA
Gliding motility protein MglA; Required for multicellular development and for both mechanisms of gliding: social (S) and adventurous (A) motility. Acts as an intracellular switch to coordinate A and S motilities. Controls the direction of gliding and gliding speed; Belongs to the small GTPase superfamily. Arf family. MglA subfamily.
      
 0.491
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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