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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3102Putative lipoprotein. (538 aa)    
Predicted Functional Partners:
MXAN_4648
FHA domain protein; Identified by match to protein family HMM PF00498.
      
 0.806
glyS
glycyl-tRNA synthetase, beta subunit; Identified by similarity to SP:P00961; match to protein family HMM PF02092; match to protein family HMM TIGR00211.
       0.801
glyQ
glycyl-tRNA synthetase, alpha subunit; Identified by match to protein family HMM PF02091; match to protein family HMM TIGR00388.
       0.792
MXAN_3103
Putative lipoprotein.
       0.773
MXAN_3108
FHA domain/tetratricopeptide repeat protein; Identified by match to protein family HMM PF00498.
     
 0.732
MXAN_3618
Non-ribosomal peptide synthetase; Identified by similarity to GB:AAC80285.1; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01733.
  
    0.695
MXAN_3644
Isochorismatase; Identified by similarity to SP:P45743; match to protein family HMM PF00550; match to protein family HMM PF00857.
  
    0.636
MXAN_4658
Pilus biogenesis protein, TadE family; Identified by match to protein family HMM PF07811.
      
 0.633
MXAN_4660
Pilus biogenesis protein, TadE family; Identified by match to protein family HMM PF07811.
      
 0.633
MXAN_3099
Serine/threonine protein kinase; Identified by match to protein family HMM PF00069.
       0.620
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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