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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3104FHA domain protein; Identified by match to protein family HMM PF00498. (288 aa)    
Predicted Functional Partners:
MXAN_4648
FHA domain protein; Identified by match to protein family HMM PF00498.
  
     0.755
MXAN_3404
FHA domain protein; Identified by match to protein family HMM PF00498.
  
     0.749
MXAN_5591
FHA domain/tetratricopeptide repeat protein; Identified by match to protein family HMM PF00498; match to protein family HMM PF07719.
  
     0.723
MXAN_2621
FHA domain protein; Identified by match to protein family HMM PF00498.
  
     0.688
MXAN_4649
FHA domain protein; Identified by match to protein family HMM PF00498.
  
     0.683
MXAN_3099
Serine/threonine protein kinase; Identified by match to protein family HMM PF00069.
 
 
   0.633
MXAN_3102
Putative lipoprotein.
  
    0.591
glyQ
glycyl-tRNA synthetase, alpha subunit; Identified by match to protein family HMM PF02091; match to protein family HMM TIGR00388.
       0.584
glyS
glycyl-tRNA synthetase, beta subunit; Identified by similarity to SP:P00961; match to protein family HMM PF02092; match to protein family HMM TIGR00211.
       0.584
MXAN_3103
Putative lipoprotein.
       0.584
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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