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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3111Hypothetical protein; Identified by Glimmer2; putative. (404 aa)    
Predicted Functional Partners:
MXAN_5625
Putative membrane protein.
  
     0.751
MXAN_1022
Putative membrane protein.
  
     0.716
MXAN_1439
Putative membrane protein.
  
     0.688
MXAN_5837
Bacterial Ig-like domain (group 1)/fibronectin type III domain protein; Identified by match to protein family HMM PF00041; match to protein family HMM PF02369.
  
    0.682
MXAN_4396
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.678
MXAN_0518
Putative TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
  
     0.676
MXAN_5875
Hypothetical protein; Identified by Glimmer2; putative.
  
   0.669
MXAN_7044
BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012.
 
     0.664
MXAN_5187
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.663
MXAN_1742
Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.
  
     0.651
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.