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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3143Putative xanthine dehydrogenase; Identified by similarity to SP:P22985; match to protein family HMM PF00111; match to protein family HMM PF00941; match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738; match to protein family HMM PF03450. (1273 aa)    
Predicted Functional Partners:
MXAN_3144
Putative xanthine dehydrogenase accessory factor; Identified by similarity to GB:CAB41849.1; match to protein family HMM PF02625.
 
 0.989
MXAN_5421
Putative guanine deaminase; Identified by similarity to SP:O34598; match to protein family HMM PF00383.
    
 0.916
deoD
Purine nucleoside phosphorylase; Identified by similarity to SP:P09743; match to protein family HMM PF01048; match to protein family HMM TIGR00107.
     
  0.900
hpt
Hypoxanthine phosphoribosyltransferase; Identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
 0.900
MXAN_6109
Identified by match to protein family HMM PF02625.
 
  
 0.729
MXAN_3751
Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.
 
 
  
 0.511
MXAN_7035
Conserved hypothetical protein.
 
   
 0.450
MXAN_7499
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.449
MXAN_3145
Hypothetical protein; Identified by Glimmer2; putative.
       0.443
MXAN_0927
Cysteine dioxygenase, type I; Identified by match to protein family HMM PF05995.
  
     0.441
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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