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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3149Peptidase, M6 (immune inhibitor A) family; Identified by similarity to SP:P23382; match to protein family HMM PF05547. (481 aa)    
Predicted Functional Partners:
pip
Proline iminopeptidase; Identified by similarity to SP:P52279; match to protein family HMM PF00561; match to protein family HMM TIGR01249; Belongs to the peptidase S33 family.
   
  
 0.807
MXAN_1691
Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.
      
 0.806
MXAN_3150
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
pepP
Xaa-Pro aminopeptidase; Identified by similarity to SP:P15034; match to protein family HMM PF00557; match to protein family HMM PF05195; Belongs to the peptidase M24B family.
     
 0.550
pepP-2
Xaa-Pro aminopeptidase; Identified by similarity to SP:Q05813; match to protein family HMM PF00557; match to protein family HMM PF05195.
     
 0.550
MXAN_2754
Peptidase, M4 (thermolysin) family; Identified by similarity to SP:P05806; similarity to GB:AAB62279.1; match to protein family HMM PF01447; match to protein family HMM PF01483; match to protein family HMM PF02868; match to protein family HMM PF03413; match to protein family HMM PF07504.
  
   
 0.508
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
   
  
 0.456
fibA
Matrix-associated zinc metalloprotease FibA; Identified by similarity to GB:AAL60237.1; match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF04151; match to protein family HMM PF07504.
  
   
 0.414
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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