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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3203FHA domain protein; Identified by match to protein family HMM PF00498. (388 aa)    
Predicted Functional Partners:
agmK
Adventurous gliding motility protein AgmK; Identified by similarity to GB:AAO22907.1; match to protein family HMM PF00515; match to protein family HMM PF07719.
  
   0.779
MXAN_6577
Putative lipoprotein.
  
     0.771
MXAN_5187
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.768
MXAN_0371
Conserved hypothetical protein; Identified by similarity to GB:AAR33606.1.
  
     0.766
agmX
Adventurous gliding motility protein AgmX; Identified by match to protein family HMM TIGR02098.
  
     0.765
MXAN_1162
Putative lipoprotein.
  
     0.745
MXAN_2050
Response regulator; Identified by match to protein family HMM PF00072.
 
     0.739
MXAN_3438
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
 
     0.728
MXAN_4155
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.725
MXAN_5625
Putative membrane protein.
  
     0.712
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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