STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3206DSBA-like thioredoxin domain protein; Identified by match to protein family HMM PF01323. (551 aa)    
Predicted Functional Partners:
nhaA
Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
 
      0.879
nhaA-2
Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
 
      0.782
dbsD
Thiol:disulfide interchange protein DsbD; Identified by similarity to SP:P36655; match to protein family HMM PF00085; match to protein family HMM PF02683.
  
 
 0.617
MXAN_6891
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719; match to protein family HMM PF07721.
  
 
 0.617
MXAN_0289
Putative membrane protein; Identified by similarity to GB:AAK22204.1.
  
 
 0.570
frzCD
Frizzy aggregation protein FrzCD; Identified by similarity to SP:P43500; match to protein family HMM PF00015.
    
   0.526
MXAN_6156
Cytochrome c biogenesis protein/thioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM PF02683.
  
 
 0.492
sigE
RNA polymerase sigma-E factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.441
MXAN_2506
Putative general secretion pathway protein J; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.
  
     0.425
MXAN_5808
Identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.
  
     0.422
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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