Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3208ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (302 aa)    
Predicted Functional Partners:
MXAN_3209
Putative membrane protein.
  
 
 0.860
MXAN_1548
Putative membrane spanning protein.
 
 
 0.672
MXAN_4879
Putative ABC transporter, permease protein; Identified by similarity to PIR:AF2008.
 
 
 0.665
MXAN_3210
Penicillin-binding protein transpeptidase domain protein; Identified by match to protein family HMM PF00905.
       0.559
MXAN_7144
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
     0.558
MXAN_2898
ATP-dependent metalloprotease, FtsH family; Identified by similarity to SP:P37476; match to protein family HMM PF00004; match to protein family HMM PF01434; Belongs to the AAA ATPase family.
 
    0.512
MXAN_6402
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
    
0.511
MXAN_7226
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
    
0.487
MXAN_1789
ABC transporter, ATP-binding protein/peptidase, C39 family; Identified by match to protein family HMM PF00005; match to protein family HMM PF03412.
 
     0.477
MXAN_5316
Putative daunorubicin resistance ABC transporter, permease protein; Identified by match to protein family HMM PF01061.
 
  
 0.463
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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