close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3222Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (151 aa)    
Predicted Functional Partners:
pheA
Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:P07022; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842.
       0.782
MXAN_3220
Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01842.
       0.773
MXAN_3223
Conserved hypothetical protein; Identified by similarity to GB:BAB50935.1.
       0.623
MXAN_6352
Conserved domain protein; Identified by similarity to GB:CAE80420.1; match to protein family HMM PF04151; Belongs to the peptidase S1B family.
 
     0.501
MXAN_5011
Peptidase, S1 (chymotrypsin) family; Identified by match to protein family HMM PF00089; Belongs to the peptidase S1B family.
 
     0.487
MXAN_3224
Hypothetical protein; Identified by Glimmer2; putative.
       0.443
MXAN_0587
Trypsin domain protein; Belongs to the peptidase S1B family.
 
     0.423
agmT
Hypothetical adventurous gliding motility protein AgmT; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
   
    0.404
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.