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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3241Conserved hypothetical protein; Identified by similarity to GB:BAB54219.1; match to protein family HMM PF07237. (245 aa)    
Predicted Functional Partners:
MXAN_3240
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
 
     0.705
MXAN_3242
Conserved domain protein; Identified by similarity to GB:AAN81786.1; match to protein family HMM PF04536.
  
    0.684
MXAN_0089
Glutathione S-transferase domain protein; Identified by match to protein family HMM PF02798.
 
     0.580
MXAN_0182
Identified by match to protein family HMM PF05170.
   
    0.534
MXAN_4407
Conserved domain protein; Identified by similarity to GB:AAM35435.1.
   
    0.534
MXAN_0676
Aha1 domain protein.
 
     0.459
exoD
Exopolysaccharide synthesis protein ExoD; Identified by match to protein family HMM PF06055.
  
    0.445
MXAN_6243
Conserved hypothetical protein; Identified by similarity to GB:BAB51820.1; match to protein family HMM PF06983.
 
     0.432
MXAN_4035
Identified by match to protein family HMM PF00043; match to protein family HMM PF02798.
 
     0.430
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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