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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3242Conserved domain protein; Identified by similarity to GB:AAN81786.1; match to protein family HMM PF04536. (375 aa)    
Predicted Functional Partners:
agmX
Adventurous gliding motility protein AgmX; Identified by match to protein family HMM TIGR02098.
 
  
 0.686
MXAN_3241
Conserved hypothetical protein; Identified by similarity to GB:BAB54219.1; match to protein family HMM PF07237.
  
    0.684
MXAN_6572
Iron-sulfur cluster-binding protein, Rieske family; Identified by match to protein family HMM PF00355.
 
   0.681
ctaD
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
   
   0.654
coxB
Cytochrome c oxidase, subunit II; Identified by match to protein family HMM PF00034; match to protein family HMM PF00116; match to protein family HMM TIGR02866.
   
   0.654
coxB-2
Cytochrome c oxidase, subunit II; Identified by match to protein family HMM PF00034; match to protein family HMM PF00116; match to protein family HMM TIGR02866.
   
   0.654
ctaD-2
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
   
   0.654
MXAN_1554
Iron-sulfur cluster-binding protein, Rieske family; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266.
  
   0.632
MXAN_1181
Conserved hypothetical protein; Identified by similarity to GB:CAD73061.1.
  
  
 0.631
MXAN_7373
Conserved hypothetical protein.
  
  
 0.631
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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