close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3273Peptidase, M19 (membrane dipeptidase) family; Identified by match to protein family HMM PF01244. (354 aa)    
Predicted Functional Partners:
MXAN_5086
Identified by match to protein family HMM PF00117; match to protein family HMM PF07722.
     0.916
MXAN_3274
Putative lipoprotein.
       0.671
MXAN_3272
Putative serine/threonine protein kinase; Identified by match to protein family HMM PF00069.
  
    0.647
MXAN_5879
Sigma-54 dependent transcriptional regulator, Fis family; Identified by match to protein family HMM PF00158; match to protein family HMM PF02830; match to protein family HMM PF02954; match to protein family HMM PF06505; match to protein family HMM TIGR01199.
  
  
 0.470
MXAN_4984
Putative lipoprotein.
 
  
 0.444
MXAN_7220
Putative lipoprotein.
 
  
 0.431
MXAN_0764
Peptidase, M24 (methionyl aminopeptidase 1) family; Identified by similarity to GB:CAA70068.1; match to protein family HMM PF00557.
 
  
 0.410
MXAN_3275
Conserved hypothetical protein; Identified by similarity to PIR:AE2072.
       0.401
MXAN_3276
Conserved hypothetical protein; Identified by similarity to PIR:AF2072.
       0.401
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.