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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3404FHA domain protein; Identified by match to protein family HMM PF00498. (176 aa)    
Predicted Functional Partners:
MXAN_3403
6-O-methylguanine DNA methyltransferase, DNA-binding domain protein; Identified by match to protein family HMM PF01035.
       0.768
MXAN_4648
FHA domain protein; Identified by match to protein family HMM PF00498.
  
     0.764
MXAN_3104
FHA domain protein; Identified by match to protein family HMM PF00498.
  
     0.749
k9ap1
Pkn9 associate protein 1; Identified by similarity to GB:AAS79536.1; match to protein family HMM PF00498; match to protein family HMM PF07719.
  
     0.744
MXAN_5591
FHA domain/tetratricopeptide repeat protein; Identified by match to protein family HMM PF00498; match to protein family HMM PF07719.
  
     0.732
MXAN_3108
FHA domain/tetratricopeptide repeat protein; Identified by match to protein family HMM PF00498.
  
     0.727
MXAN_2464
FHA domain protein; Identified by match to protein family HMM PF00498.
  
     0.702
MXAN_2621
FHA domain protein; Identified by match to protein family HMM PF00498.
  
     0.702
MXAN_3402
Identified by match to protein family HMM PF02557.
       0.696
MXAN_2257
FHA domain protein; Identified by match to protein family HMM PF00498.
  
     0.670
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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