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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3425Multicopper oxidase domain protein; Identified by match to protein family HMM PF07731; match to protein family HMM PF07732; match to protein family HMM TIGR01409. (440 aa)    
Predicted Functional Partners:
MXAN_3424
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
 
   
 0.918
MXAN_3431
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
 
   
 0.787
MXAN_1131
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.694
MXAN_3426
RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.
       0.594
MXAN_0979
Copper-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM PF04945; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
 
  
 0.576
MXAN_3415
Copper-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM PF04945; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
 
  
 0.575
MXAN_6225
Putative lipoprotein.
   
 
 0.568
MXAN_6089
Putative cytochrome c oxidase, subunit IV; Identified by similarity to GB:CAC08534.1; match to protein family HMM TIGR02229.
    
 
 0.512
ccoNO
Cytochrome c oxidase, cbb3-type, subunit I/II; Identified by match to protein family HMM PF00115; match to protein family HMM PF02433; match to protein family HMM TIGR00780; match to protein family HMM TIGR00781; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.474
tatC
Putative Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.447
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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