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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3440Peptidase, M13 (neprilysin) family; Identified by similarity to GB:BAA24495.1; match to protein family HMM PF01431; match to protein family HMM PF05649. (714 aa)    
Predicted Functional Partners:
MXAN_3439
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
       0.565
MXAN_5454
Peptidase, M36 (fungalysin) family; Identified by similarity to SP:P46075; match to protein family HMM PF02225.
 
    0.554
MXAN_6145
Peptidase, M36 (fungalysin) family; Identified by similarity to SP:P46075; match to protein family HMM PF02225.
 
    0.547
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
   
    0.538
MXAN_5137
Peptidase, M1 (aminopeptidase N) family; Identified by similarity to SP:P24527; match to protein family HMM PF01433.
 
   
 0.536
MXAN_3581
Identified by match to protein family HMM PF01401.
  
   
 0.515
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.513
MXAN_2498
Conserved hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.511
MXAN_3564
Peptidase, M36 (fungalysin) family; Identified by similarity to SP:P46075; match to protein family HMM PF02225.
 
    0.508
MXAN_6811
Peptidase, S9A (prolyl oligopeptidase) subfamily; Identified by similarity to SP:Q06903; match to protein family HMM PF00326; match to protein family HMM PF02897.
  
  
 0.463
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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