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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3447Hypothetical protein; Identified by Glimmer2; putative. (405 aa)    
Predicted Functional Partners:
MXAN_3448
Putative lipoprotein; Identified by match to protein family HMM TIGR01730.
  
   0.858
MXAN_3449
Heavy metal efflux pump, CzcA family; Identified by similarity to SP:P94177; match to protein family HMM PF00873; match to protein family HMM TIGR00914; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
 0.810
MXAN_3450
DNA-binding heavy metal response regulator; Identified by similarity to SP:Q02540; match to protein family HMM PF00072; match to protein family HMM PF00486.
  
   0.758
MXAN_3451
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
       0.745
MXAN_3446
Identified by match to protein family HMM PF01757.
       0.592
MXAN_1788
Identified by match to protein family HMM PF00529.
  
 
 0.578
MXAN_4175
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.578
MXAN_7147
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.
  
 
 0.578
uvrA-3
UvrABC system, A protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
   
   0.492
MXAN_3445
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.429
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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