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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aroFPhospho-2-dehydro-3-deoxyheptonate aldolase; Identified by match to protein family HMM PF00793; match to protein family HMM TIGR01361. (303 aa)    
Predicted Functional Partners:
MXAN_3521
Putative 3-dehydroquinate synthase; Identified by match to protein family HMM PF01761.
 
 
 0.990
pheA
Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:P07022; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842.
 
  
 0.961
MXAN_3219
Putative phospho-2-dehydro-3-deoxyheptonate aldolase; Identified by match to protein family HMM PF00793.
  
  
 
0.917
MXAN_3220
Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01842.
 
  
 0.913
aroF-2
Phospho-2-dehydro-3-deoxyheptonate aldolase; Identified by match to protein family HMM PF00793; match to protein family HMM TIGR01361.
  
  
 
0.905
MXAN_3642
3-deoxy-7-phosphoheptulonate synthase; Identified by similarity to SP:P29976; match to protein family HMM PF01474; match to protein family HMM TIGR01358.
     
  0.900
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
       0.773
MXAN_5840
Prephenate dehydrogenase/chorismate mutase; Identified by match to protein family HMM PF01210; match to protein family HMM PF01817; match to protein family HMM PF02153; match to protein family HMM PF03446; match to protein family HMM PF03807.
  
  
 0.749
MXAN_3520
Putative 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
 
  
 0.724
MXAN_3524
Putative shikimate kinase; Identified by match to protein family HMM PF01202.
  
  
 0.642
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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