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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3598DNA-cytosine methyltransferase; Identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (505 aa)    
Predicted Functional Partners:
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
 0.933
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
 0.911
vsr
Very short patch repair protein; Identified by similarity to SP:P09184; match to protein family HMM PF03852.
 
   
 0.901
MXAN_3602
Conserved hypothetical protein; Identified by similarity to GB:BAC15296.1.
 
  
 0.830
MXAN_3603
Conserved hypothetical protein.
 
     0.754
MXAN_3601
ATPase; Identified by match to protein family HMM PF02518.
 
  
 0.751
MXAN_3604
Conserved hypothetical protein; Identified by similarity to GB:BAC12133.1.
 
   
 0.700
MXAN_1138
Putative hydrolase; Identified by match to protein family HMM PF04307.
  
    0.672
MXAN_5486
Putative hydrolase; Identified by match to protein family HMM PF04307.
   
    0.541
hisIE
phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase; Identified by similarity to SP:P06989; match to protein family HMM PF01502; match to protein family HMM PF01503; In the N-terminal section; belongs to the PRA-CH family.
   
    0.507
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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