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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3735Response regulator; Identified by similarity to GB:AAR36766.1; match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254. (318 aa)    
Predicted Functional Partners:
MXAN_2317
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
 
 0.966
MXAN_2424
EAL domain protein; Identified by match to protein family HMM PF00563.
 
 
 0.966
MXAN_4675
Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01966.
  
 0.959
MXAN_2061
HAMP domain/HD domain protein; Identified by match to protein family HMM PF00672; match to protein family HMM PF01966.
  
 0.956
MXAN_6971
Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
 
 0.871
MXAN_6735
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518.
 
 
0.853
MXAN_6702
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
 
 
 0.830
MXAN_3734
Response regulator; Identified by match to protein family HMM PF00072.
 
 
 0.825
MXAN_0712
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518.
 
 
0.813
MXAN_4232
Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01966.
  
0.800
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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