STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3751Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155. (396 aa)    
Predicted Functional Partners:
MXAN_6779
Putative 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Identified by similarity to SP:P56220; Belongs to the transferase hexapeptide repeat family.
  
 
 0.911
argD
Acetylornithine transaminase; Identified by similarity to SP:P54752; match to protein family HMM PF00202; match to protein family HMM TIGR00707; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
 
 0.907
MXAN_6777
Putative succinyl-diaminopimelate desuccinylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687.
  
 
 0.904
MXAN_3753
hydroxymethylglutaryl-CoA lyase; Identified by similarity to GB:AAB50182.1; match to protein family HMM PF00682.
  
  
 0.793
MXAN_3752
Conserved hypothetical protein; Identified by similarity to PIR:F75292.
       0.773
MXAN_3750
PAP2 family protein.
       0.658
MXAN_3220
Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01842.
 
  
 0.559
MXAN_3749
Putative membrane protein.
       0.555
MXAN_0971
Aspartate kinase/homoserine dehydrogenase; Identified by similarity to SP:P00561; match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF03447; match to protein family HMM TIGR00657.
  
 
 0.535
MXAN_2278
Aspartate kinase/homoserine dehydrogenase; Identified by similarity to SP:P00561; match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447; match to protein family HMM TIGR00657.
  
 
 0.535
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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