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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3783Transferase hexapeptide repeat family protein; Identified by match to protein family HMM PF00132. (171 aa)    
Predicted Functional Partners:
miaB
tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
       0.808
MXAN_3782
Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027.
     
 0.679
MXAN_3785
Hypothetical protein; Identified by Glimmer2; putative.
       0.568
MXAN_0617
Putative carbonic anhydrase; Identified by similarity to GB:AAR82947.1; match to protein family HMM PF00484.
    
 
 0.562
cynT
Carbonic anhydrase; Identified by similarity to SP:P17582; match to protein family HMM PF00484.
    
 
 0.562
MXAN_6524
Identified by match to protein family HMM PF02492; match to protein family HMM PF07683.
  
  
 0.528
pyrC
Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
  
 0.506
MXAN_3786
Hypothetical protein; Identified by Glimmer2; putative.
       0.490
ppa-2
Inorganic pyrophosphatase; Identified by similarity to SP:Q43187; match to protein family HMM PF00719.
      0.461
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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