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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3810Hydrolase, CocE/NonD family; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976. (645 aa)    
Predicted Functional Partners:
MXAN_4747
Putative lipoprotein.
  
     0.663
MXAN_1455
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.585
MXAN_4457
Identified by similarity to GB:AAF80345.1; match to protein family HMM PF01663.
 
     0.576
MXAN_3811
Sigma-54 dependent DNA-binding reponse regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199.
       0.574
MXAN_3812
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
       0.574
MXAN_3165
Conserved domain protein; Identified by similarity to GB:AAM36319.1.
  
     0.536
MXAN_4746
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
  
     0.502
MXAN_2221
Peptidase, M27 (PrtB) family; Identified by similarity to GB:CAA71521.1.
  
     0.501
nnrD
YjeF-like protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimer [...]
   
    0.497
prtB
Identified by similarity to GB:CAA71521.1.
  
     0.494
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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