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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nhaANa+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. (449 aa)    
Predicted Functional Partners:
MXAN_4966
Putative lipoprotein; Identified by match to protein family HMM PF01323.
 
      0.900
MXAN_3206
DSBA-like thioredoxin domain protein; Identified by match to protein family HMM PF01323.
 
      0.879
MXAN_7304
Thioredoxin domain protein; Identified by match to protein family HMM PF01323.
 
 
    0.853
cysJ
Sulfite reductase [NADPH] flavoprotein, alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component.
      
 0.807
MXAN_3899
ABC1 domain protein; Identified by match to protein family HMM PF03109.
       0.719
MXAN_5197
Thioredoxin domain protein; Identified by match to protein family HMM PF01323.
 
      0.648
MXAN_0948
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.538
MXAN_2206
Conserved domain protein; Identified by similarity to PIR:S75633.
   
    0.538
MXAN_4986
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.538
MXAN_5507
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.538
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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