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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3910Putative membrane protein; Identified by similarity to GB:BAC89751.1; match to protein family HMM PF02405. (248 aa)    
Predicted Functional Partners:
MXAN_3912
Mce family protein; Identified by match to protein family HMM PF02470.
 
 0.988
MXAN_3718
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.985
MXAN_0250
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.984
MXAN_1124
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.984
MXAN_3911
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.984
MXAN_7226
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.984
MXAN_3719
Mce family protein; Identified by match to protein family HMM PF02470.
 
 0.980
MXAN_3908
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.973
MXAN_0251
Mce family protein; Identified by match to protein family HMM PF02470.
 
 0.959
MXAN_3909
Putative membrane protein; Identified by similarity to GB:AAM71573.1; match to protein family HMM PF02405.
 
  
 
0.888
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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