rnk protein (Myxococcus xanthus) - STRING interaction network

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Score

rnk

Regulator of nucleoside diphosphate kinase; Identified by similarity to SP:P40679; match to protein family HMM PF01272. (138 aa)

Predicted Functional Partners:

rpoC

0.725

rpoB

0.640

rpoA

0.633

rpoZ

0.625

MXAN_3917

0.593

pnpA

0.530

rpsO

0.529

MXAN_3918

0.512

Your Current Organism:

Myxococcus xanthus

NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MXAN_3917	MXAN_3918	MXAN_3917	MXAN_3918	Glutamate synthase, large subunit; Identified by similarity to SP:P39812; similarity to SP:P55037; match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	Glutamate synthase, small subunit; Identified by similarity to GB:BAA12742.1; match to protein family HMM PF07992; match to protein family HMM TIGR01317.	0.999
MXAN_3917	rnk	MXAN_3917	MXAN_3919	Glutamate synthase, large subunit; Identified by similarity to SP:P39812; similarity to SP:P55037; match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	Regulator of nucleoside diphosphate kinase; Identified by similarity to SP:P40679; match to protein family HMM PF01272.	0.593
MXAN_3917	rpoC	MXAN_3917	MXAN_3078	Glutamate synthase, large subunit; Identified by similarity to SP:P39812; similarity to SP:P55037; match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.471
MXAN_3918	MXAN_3917	MXAN_3918	MXAN_3917	Glutamate synthase, small subunit; Identified by similarity to GB:BAA12742.1; match to protein family HMM PF07992; match to protein family HMM TIGR01317.	Glutamate synthase, large subunit; Identified by similarity to SP:P39812; similarity to SP:P55037; match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	0.999
MXAN_3918	rnk	MXAN_3918	MXAN_3919	Glutamate synthase, small subunit; Identified by similarity to GB:BAA12742.1; match to protein family HMM PF07992; match to protein family HMM TIGR01317.	Regulator of nucleoside diphosphate kinase; Identified by similarity to SP:P40679; match to protein family HMM PF01272.	0.512
pnpA	rnk	MXAN_2073	MXAN_3919	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	Regulator of nucleoside diphosphate kinase; Identified by similarity to SP:P40679; match to protein family HMM PF01272.	0.530
pnpA	rpoA	MXAN_2073	MXAN_3326	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.833
pnpA	rpoB	MXAN_2073	MXAN_3077	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.844
pnpA	rpoC	MXAN_2073	MXAN_3078	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.744
pnpA	rpsO	MXAN_2073	MXAN_2072	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.820
rnk	MXAN_3917	MXAN_3919	MXAN_3917	Regulator of nucleoside diphosphate kinase; Identified by similarity to SP:P40679; match to protein family HMM PF01272.	Glutamate synthase, large subunit; Identified by similarity to SP:P39812; similarity to SP:P55037; match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	0.593
rnk	MXAN_3918	MXAN_3919	MXAN_3918	Regulator of nucleoside diphosphate kinase; Identified by similarity to SP:P40679; match to protein family HMM PF01272.	Glutamate synthase, small subunit; Identified by similarity to GB:BAA12742.1; match to protein family HMM PF07992; match to protein family HMM TIGR01317.	0.512
rnk	pnpA	MXAN_3919	MXAN_2073	Regulator of nucleoside diphosphate kinase; Identified by similarity to SP:P40679; match to protein family HMM PF01272.	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.530
rnk	rpoA	MXAN_3919	MXAN_3326	Regulator of nucleoside diphosphate kinase; Identified by similarity to SP:P40679; match to protein family HMM PF01272.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.633
rnk	rpoB	MXAN_3919	MXAN_3077	Regulator of nucleoside diphosphate kinase; Identified by similarity to SP:P40679; match to protein family HMM PF01272.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.640
rnk	rpoC	MXAN_3919	MXAN_3078	Regulator of nucleoside diphosphate kinase; Identified by similarity to SP:P40679; match to protein family HMM PF01272.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.725
rnk	rpoZ	MXAN_3919	MXAN_4890	Regulator of nucleoside diphosphate kinase; Identified by similarity to SP:P40679; match to protein family HMM PF01272.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.625
rnk	rpsO	MXAN_3919	MXAN_2072	Regulator of nucleoside diphosphate kinase; Identified by similarity to SP:P40679; match to protein family HMM PF01272.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.529
rpoA	pnpA	MXAN_3326	MXAN_2073	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.833
rpoA	rnk	MXAN_3326	MXAN_3919	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Regulator of nucleoside diphosphate kinase; Identified by similarity to SP:P40679; match to protein family HMM PF01272.	0.633