STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_3921Identified by match to protein family HMM PF00034. (102 aa)    
Predicted Functional Partners:
MXAN_3920
Putative sporulation initiation inhibitor protein; Identified by similarity to SP:P37522; match to protein family HMM PF01656.
       0.773
MXAN_3417
Putative lipoprotein; Identified by match to protein family HMM TIGR02276.
  
  
 0.725
MXAN_3414
Putative cytochrome c.
  
  
 0.570
MXAN_3922
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.559
MXAN_3923
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family, permease protein; Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.532
rpmI
Ribosomal protein L35; Identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family.
  
     0.505
MXAN_3925
GMC oxidoreductase; Identified by match to protein family HMM PF00732; match to protein family HMM PF01266.
 
     0.438
MXAN_5219
Oxidoreductase, molybdopterin-binding; Identified by match to protein family HMM PF00174.
   
 
 0.434
MXAN_4875
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.425
MXAN_6867
Putative lipoprotein.
  
    0.425
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.