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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nla6Sigma-54 dependent DNA-binding reponse regulator Nla6; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199. (484 aa)    
Predicted Functional Partners:
MXAN_1077
Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
  
  
  0.747
MXAN_4262
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
  
 0.743
MXAN_3106
Protein transporter, outer bacterial membrane secretin (secretin) family; Identified by match to protein family HMM PF00263; Belongs to the bacterial secretin family.
   
  
 0.742
MXAN_6015
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
  
  
  0.740
frgB
Sensor histidine kinase FrgB; Identified by similarity to GB:AAF18102.1; match to protein family HMM PF00512; match to protein family HMM PF02518.
  
 
  0.735
MXAN_0459
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
 
  0.731
mrpA
Sensor histidine kinase MrpA; Identified by similarity to GB:AAF99324.1; match to protein family HMM PF00512; match to protein family HMM PF02518.
  
 
  0.729
MXAN_3812
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
  
 
  0.718
MXAN_4197
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
  
  
  0.706
MXAN_4244
Sensor histidine kinase / response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.
  
 
 
0.697
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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