close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4109Hypothetical protein; Identified by Glimmer2; putative. (468 aa)    
Predicted Functional Partners:
MXAN_4108
Putative lipoprotein; Identified by match to protein family HMM PF07627.
 
    0.954
MXAN_0569
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.768
MXAN_5000
SPFH domain/band 7 family.
  
     0.760
MXAN_5487
Tat (twin-arginine translocation) pathway signal sequence domain protein; Identified by match to protein family HMM PF07586; match to protein family HMM TIGR01409.
  
     0.759
MXAN_3826
Conserved hypothetical protein; Identified by match to protein family HMM PF07626; match to protein family HMM PF07627; match to protein family HMM PF07631; match to protein family HMM PF07637.
  
     0.754
MXAN_7105
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.753
MXAN_7127
FG-GAP repeat protein; Identified by match to protein family HMM PF01839.
  
     0.749
MXAN_5304
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.747
MXAN_3827
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.743
MXAN_4181
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.741
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.