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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4123Hypothetical protein; Identified by Glimmer2; putative. (391 aa)    
Predicted Functional Partners:
MXAN_0221
Lipase; Identified by match to protein family HMM PF01674.
  
     0.685
agmQ
Adventurous gliding motility protein AgmQ; Identified by similarity to GB:AAO66326.1; match to protein family HMM PF04151.
  
     0.677
MXAN_6725
PDZ domain protein; Identified by match to protein family HMM PF00595.
  
   
 0.676
MXAN_5216
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.660
MXAN_2297
Conserved hypothetical protein; Identified by similarity to PIR:AH2368.
  
    0.646
MXAN_6352
Conserved domain protein; Identified by similarity to GB:CAE80420.1; match to protein family HMM PF04151; Belongs to the peptidase S1B family.
  
     0.646
MXAN_5998
Putative lipase; Identified by similarity to GB:BAA09135.1.
  
     0.616
MXAN_1365
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.612
MXAN_5010
FG-GAP repeat domain protein; Identified by match to protein family HMM PF01839.
  
    0.593
MXAN_7127
FG-GAP repeat protein; Identified by match to protein family HMM PF01839.
  
     0.588
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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