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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4187Conserved hypothetical protein; Identified by similarity to SP:P40407; match to protein family HMM PF07075. (406 aa)    
Predicted Functional Partners:
MXAN_1911
Beta-lactamase; Identified by match to protein family HMM PF00144.
  
 0.980
MXAN_6621
Identified by match to protein family HMM PF00933.
  
 0.956
nadD
Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
       0.806
MXAN_4186
Hypothetical protein; Identified by Glimmer2; putative.
       0.781
MXAN_4188
Adenylate/guanylate cyclase domain protein; Identified by match to protein family HMM PF00211.
       0.777
MXAN_4189
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
       0.746
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.535
MXAN_4182
Conserved hypothetical protein.
       0.520
MXAN_4183
Hypothetical protein; Identified by Glimmer2; putative.
       0.520
MXAN_4184
Hypothetical protein; Identified by Glimmer2; putative.
       0.520
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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